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Series GSE5870 Query DataSets for GSE5870
Status Public on Jan 01, 2007
Title Gnotobiotic mouse cecal epithelium; B.thetaiotaomicron-B. longum mono- versus bi-association, PR chow, NMRI
Platform organisms Homo sapiens; Mus musculus
Sample organism Mus musculus
Experiment type Expression profiling by array
Summary Laser captured cecal epithelium from gnotobiotic mice colonized with B. thetaiotaomicron or B. longum (mono-association) or B. thetaiotaomicron bi-association with B. longum. Samples were derived from 10d colonizations of NMRI mice fed a standard-chow polysaccharide rich (PR) diet.
Keywords: Germ-free vs. Mono-associations or Bi-association, in vivo
Overall design Total RNA was prepared from laser captured cecal epithelium of 10 day associated gnotobiotic mice, double amplified, and hybridized to 430 2.0 GeneChips or to GlycoGeneChipsv1.
Contributor(s) Sonnenburg JL, Chen CT, Gordon JI
Citation(s) 17132046
Submission date Sep 19, 2006
Last update date Feb 11, 2019
Contact name Justin L. Sonnenburg
Phone 314-362-5443
Organization name Washington University
Department Center for Genome Sciences
Lab Jeffrey I. Gordon
Street address 4444 Forest Park
City Saint Louis
State/province MO
ZIP/Postal code 63108
Country USA
Platforms (2)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
GPL1981 GLYCOv1 glycogene array
Samples (16)
GSM136183 GF NMRI mice LCM cecal epithelium (pool of 4 animals)_#9128
GSM136184 GF NMRI mice LCM cecal epithelium (pool of 4 animals)_#9129
GSM136421 B. thetatiotaomicron mono-associated (10d) gnotobiotic NMRI mice LCM cecal epithelium (pool of 4 animals)_#9130
BioProject PRJNA97281

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