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Series GSE59308 Query DataSets for GSE59308
Status Public on Aug 01, 2016
Title Differentiation of DLBCL induced by HDAC inhibitors is associated with sensitization to proteasome inhibition
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Epigenetic modifying enzymes are commonly mutated in diffuse large B cell lymphoma (DLBCL), suggesting that epigenetic regulation is an important factor in DLBCL pathogenesis and a potential target for therapy. We developed resistant cell lines to histone deacetylase inhibitors (HDACi), one such epigenetic therapy, in order to define mechanisms of response and resistance. Strikingly, using gene expression and metabolic profiling, we found that development of HDACi resistance was associated with differentiation toward a plasmablast-like phenotype. Differentiation correlated with decreased B cell receptor signaling, increased ER stress and activation of the unfolded protein response, and increased sensitivity to proteasome inhibitors. Importantly, we found evidence of differentiation in lymphoma biopsies from patients treated with HDACi. Together, these data show, for the first time, that HDACi are differentiating agents in lymphoma and may be used to prime DLBCL for targeted therapy including proteasome inhibitors.
 
Overall design Gene expression in DLBCL cells from tumor biopsies after 15 days panobinostat therapy
 
Contributor(s) Mann KK, Miller WH
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Submission date Jul 10, 2014
Last update date Jan 09, 2018
Contact name Koren Mann
Organization name Lady Davis Institute
Lab Dr. Koren Mann
Street address 3755 Cote Ste Catherine
City Montreal
State/province Quebec
ZIP/Postal code H3T1E2
Country Canada
 
Platforms (2)
GPL14550 Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Probe Name Version)
GPL17077 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
Samples (6)
GSM1434765 P.7.Pre
GSM1434766 P.7.Post 15d
GSM1434767 P.19.Pre
Relations
BioProject PRJNA255039

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE59308_RAW.tar 18.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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