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Series GSE59951 Query DataSets for GSE59951
Status Public on Sep 09, 2015
Title Expression analysis of KHR and KR oral tumors with intact or deficient Notch1
Organism Mus musculus
Experiment type Expression profiling by array
Summary KHR and KR tumors grow faster when deficient for Notch1. The hypothesis was to test for differences in gene expression between KHR and KHR oral tumors with intact or deficient Notch1 haplotypes.
 
Overall design Total RNA was isolated for KHR (n=5), KHR-N+/- (n=4), KHR-N-/- (n=5), KR-N+/- (n=5), KR-N-/- (n=4) oral tumors. Expression profiling was performed using the Illumina MouseRef-8 v2 (GPL6885) array. Studies were conducted using tumors from C57BL/6 mice.
 
Contributor(s) Zhong R, Bao R, Faber P, Lingen M, Spiotto M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 31, 2014
Last update date Jun 14, 2018
Contact name Michael Spiotto
E-mail(s) mspiotto@radonc.uchicago.edu
Organization name The University of Chicago
Department Radiation Oncology
Lab KCBD 6142
Street address 900 E. 57th St
City Chicago
State/province IL
ZIP/Postal code 60637
Country USA
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (23)
GSM1462664 MTS 1 (KR-N+/-)
GSM1462665 MTS 2 (KR-N+/-)
GSM1462666 MTS 8 (KR-N-/-)
Relations
BioProject PRJNA257155

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE59951_RAW.tar 3.1 Mb (http)(custom) TAR
GSE59951_non-normalized.txt.gz 6.8 Mb (ftp)(http) TXT
Processed data included within Sample table
Raw data are available on Series record

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