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Series GSE60039 Query DataSets for GSE60039
Status Public on Aug 15, 2014
Title Commensal bacteria protect against food allergen sensitization
Organism Mus musculus
Experiment type Expression profiling by array
Summary Analysis of colonic epithelial cell gene expression in germ-free, Bacteroides uniformis-colonized, and Clostridia-colonized gnotobiotic mice.
Bacteria were isolated from our SPF mouse facility and were used to selectively colonize germ-free mice.
 
Overall design Germ free mice were left germ free or were colonized with Bacteroides uniformis or a consortium of Clostridia. Total RNA was extraced from colonic epithelial cells.
 
Contributor(s) Stefka AT, Nagler CR, Feehley T
Citation(s) 25157157
Submission date Aug 04, 2014
Last update date Jun 14, 2018
Contact name Cathryn Nagler
Organization name University of Chicago
Street address 924 E 57th St
City Chicago
State/province IL
ZIP/Postal code 60637
Country USA
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (8)
GSM1464087 CN1
GSM1464088 CN2
GSM1464089 CN3
Relations
BioProject PRJNA257364

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60039_RAW.tar 3.1 Mb (http)(custom) TAR
GSE60039_non-normalized.txt.gz 836.9 Kb (ftp)(http) TXT
Raw data are available on Series record
Processed data included within Sample table

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