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Series GSE60120 Query DataSets for GSE60120
Status Public on Jul 18, 2017
Title Mistranslation accelerates the evolution of antifungal drug resistance in Candida albicans [CGH]
Platform organism Candida albicans SC5314
Sample organism Candida albicans
Experiment type Genome variation profiling by array
Summary The fungal pathogen Candida albicans and other pathogens of the CTG clade reassigned the leucine CUG codon to serine and tolerate highly variable levels of both serine and leucine at CUG positions in response to environmental cues. Previous studies found that increased leucine misincorporation levels enhance resistance to drugs but the underlying mechanisms are not known. To clarify the biological role of this tuneable codon ambiguity, we evolved C. albicans strains engineered to mistranslate CUG at elevated levels, in the presence and absence of the antifungal drug fluconazole
 
Overall design CGH analysis was performed on evolved C.albicans strains grown in presence of fluconazole and the parental strain not subjected to fluconazole.
 
Contributor(s) Weil T, SantamarĂ­a R
Citation(s) 28808688
Submission date Aug 05, 2014
Last update date Oct 17, 2017
Contact name Tobias Weil
E-mail(s) tobias.weil@fmach.it
Organization name Fondazione Edmund Mach
Street address Via E. Mach, 1
City S. Michele all'Adige (TN)
ZIP/Postal code 38010
Country Italy
 
Platforms (1)
GPL19026 Agilent-038464 CaSC5314_SnpCgh_v1_Santos 033626
Samples (3)
GSM1465295 t1_fluc_end_rep1
GSM1465296 t1_fluc_end_rep2
GSM1465297 t1_fluc_end_rep3
This SubSeries is part of SuperSeries:
GSE60122 Mistranslation accelerates the evolution of antifungal drug resistance in Candida albicans
Relations
BioProject PRJNA257517

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60120_RAW.tar 15.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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