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Series GSE60283 Query DataSets for GSE60283
Status Public on Nov 01, 2014
Title Impact of HP1gamma and HP1gamma S83 phosphorylation on the transcriptionnal effect of PMA stimulation of mouse fibroblasts
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We have here followed the transcriptional effect of stimulation with the phorbol ester PMA in mouse fibroblasts from HP1gamma null mice recomplemented with either wild-type HP1gamma or an HP1g with an S83A mutation
 
Overall design Spontaneously immortalized mouse embryonic fibroblasts from HP1gamma null mice were used to stably integrate either an empty expression vector, or expression vectors for either WT or S83A mutant HP1gamma. These cells were then stimulated with PMA for 0 or 60 min. and used for transcriptome analysis by Next Generation sequencing.
 
Contributor(s) ARBIBE L, RACHEZ C, CAMMAS F, MUCHARDT C
Citation(s) 25216677
Submission date Aug 11, 2014
Last update date May 15, 2019
Contact name Christian MUCHARDT
E-mail(s) muchardt@pasteur.fr
Phone 0033145688525
Organization name Institut Pasteur Paris
Department Developmental and Stem Cell Biology
Lab Epigenetic Regulation
Street address 25 rue du Dr-Roux
City Paris cedex 15
ZIP/Postal code 75724
Country France
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (18)
GSM1493683 CTL- [Rev_M_1]
GSM1493684 CTL- [Rev_M_2]
GSM1493685 CTL- [Rev_M_3]
Relations
BioProject PRJNA259825
SRA SRP045890

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60283_RACHEZ_2014_08_DESEQ_data.xlsx.gz 11.0 Mb (ftp)(http) XLSX
GSE60283_RNA-SEQ_CTLPlus_vs_CTLMinus.xlsx.gz 2.8 Mb (ftp)(http) XLSX
GSE60283_RNA-SEQ_HP1_Plus_vs_HP1_Minus.xlsx.gz 2.5 Mb (ftp)(http) XLSX
GSE60283_RNA-SEQ_MUT1_Plus_vs_MUT1_Minus.xlsx.gz 3.1 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

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