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Series GSE60436 Query DataSets for GSE60436
Status Public on Aug 16, 2014
Title Gene Expression Profile of Fibrovascular Membrane Associated with Proliferative Diabetic Retinopathy
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Proliferative diabetic retinopathy (PDR) is a vision-threatening disorder characterized by the formation of cicatricial fibrovascular membranes leading to traction retinal detachment. Despite the recent advance in the treatment of PDR such as vitreoretinal surgery with use of anti-vascular endothelial growth factor (VEGF) drug as an adjunct, it still remains vision-threatening disease.
In order to identify genes associated with the pathogenesis of PDR, we performed gene expression analyses in fibrovascular membrane in patients with PDR using DNA microarray technology.
 
Overall design This study was approved by the Ethics Committee of the Kyushu University Hospital and Fukuoka University Chikushi Hospital, and the surgical specimens were handled in accordance with the ethical standards of the 1989 Declaration of Helsinki. All patients gave informed consent before inclusion in the study. Fibrovascular membranes (FVMs) were surgically dissected from the retinal surface with horizontal scissors of patients with PDR undergoing pars plana vitrectomy. These specimens were classified into active and inactive according to the clinical findings of neovascularization (NV) in the FVMs.Total RNA were extracted from the FVMs. RNA from human retina was obtained from Clontech (Palo Alto, CA).
 
Contributor(s) Ishikawa K, Yoshida S
Citation(s) 25604687
Submission date Aug 15, 2014
Last update date Feb 18, 2019
Contact name Keijiro Ishikawa
E-mail(s) keijishi@med.kyushu-u.ac.jp
Organization name Kyushu University
Department Ophthalmology
Street address 3-1-1 Maidashi, Higashi-ku
City Fukuoka
ZIP/Postal code 812-8582
Country Japan
 
Platforms (1)
GPL6884 Illumina HumanWG-6 v3.0 expression beadchip
Samples (9)
GSM1479904 Retina_1
GSM1479905 Retina_2
GSM1479906 Retina_3
Relations
BioProject PRJNA258255

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60436_RAW.tar 6.3 Mb (http)(custom) TAR
GSE60436_non-normalized_data.txt.gz 1.8 Mb (ftp)(http) TXT
Processed data included within Sample table

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