NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE60442 Query DataSets for GSE60442
Status Public on Sep 16, 2014
Title Ebf2 is a selective marker of brown and beige adipogenic precursor cells (Microarray)
Organism Mus musculus
Experiment type Expression profiling by array
Summary Brown adipocytes, muscle and dorsal dermis descend from precursor cells in the dermomyotome, but the factors that regulate commitment to the brown adipose lineage are unknown. Here, we prospectively isolated and determined the molecular profile of embryonic brown preadipose cells. Brown adipogenic precursor activity in embryos was confined to Pdgfrα+, Myf5Cre-lineage-marked cells. RNAseq analysis identified Early B Cell Factor-2 (Ebf2) as one of the most selectively expressed genes in this cell fraction. Importantly, Ebf2-expressing cells purified from Ebf2-GFP embryos or brown fat tissue did not express myoblast or dermal cell markers and uniformly differentiated into brown adipocytes. Interestingly, Ebf2-expressing cells from white fat tissue in adult animals differentiated into brown-like (or beige) adipocytes. Loss of Ebf2 in brown preadipose cells reduced the expression levels of brown preadipose-signature genes, whereas ectopic Ebf2-expression in myoblasts activated brown preadipose-specific genes. Altogether, these results indicate that Ebf2 specifically marks and regulates the molecular profile of brown preadipose cells.
 
Overall design Embryonic fibroblasts, isolated from dorsal body wall of E14.5 Ebf2(GFP)/+ embryos, were further fractionated based on the expression of PDGFRα and Ebf2 (GFP). Affymetrix microarray analysis was prefromed,to compare the gene expression between PDGFRα+ Ebf2(GFP)- and PDGFRα+ Ebf2(GFP)+ cells.
 
Contributor(s) Wang W, Kissig M, Rajakumari S, Huang L, Lim H, Won K, Seale P
Citation(s) 25197048
Submission date Aug 15, 2014
Last update date Feb 21, 2018
Contact name Hee-Woong Lim
Organization name Cincinnati Children's Hospital Medical Center
Department Division of Biomedical Informatics
Street address 3333 Burnet Ave. MLC 7024
City Cincinnati
State/province Ohio
ZIP/Postal code 45229
Country USA
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (6)
GSM1480194 Ebf2(GFP)-:Pdgfra+, replicate 1
GSM1480195 Ebf2(GFP)-:Pdgfra+, replicate 2
GSM1480196 Ebf2(GFP)-:Pdgfra+, replicate 3
This SubSeries is part of SuperSeries:
GSE60443 Ebf2 is a selective marker of brown and beige adipogenic precursor cells
Relations
BioProject PRJNA258275

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60442_RAW.tar 60.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap