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Series GSE61119 Query DataSets for GSE61119
Status Public on Dec 29, 2014
Title Self-renewal of hepatoblasts under chemically defined conditions by reiterative growth factor and chemical screening
Organism Mus musculus
Experiment type Expression profiling by array
Summary Throught an reiterative growth factor and chemical screening, we defined a small molecule and growth factor cocktail, including EGF, glycogen synthase kinase 3 inhibitor (CHIR99021), transforming growth factor β receptor inhibitor (e.g. E-616452), lysophosphatidic acid and sphingosine 1-phosphate, that can sustain long-term self-renewal of murine hepatoblasts under chemically defined conditions. The expandable hepatoblasts (eHBs) by this small molecule and growth factor cocktail expressed a set of genes typical of liver progenitor cells and liver development, and retained the ability to respond to liver developmental cues and produce functional hepatocytes and form bile duct-like structures. Moreover, both early- and late-passage eHBs demonstrated a similar transcriptome profile. Microarray analysis also confirmed that the gene expression of cultured cells resembled hepatoblasts.
 
Overall design Expandable hepatoblasts (eHBs) were routinely cultured in basal medium (DMEM/F12 medium supplemented with insulin-transferrin-sodium selenite, 5 mM nicotinamide, 30 μg/ml 2-phospho-L-ascorbic acid and 50 μg/ml bovine serum albumin human recombinant albumin and 1% penicillin/streptomycin including 10 ng/ml EGF, 3 μM CHIR99021, 2 μM E-616452, 5 μM LPA and 0.5 μM S1P, on Matrigel or laminin-coated surface. The culture was split 1:6 using Accutase. Total RNA was prepared from passage 5 and passage 20 of eHBs (passage 5 and passage 20 of eHBs were derived from two independent experiments) using the RNeasy Plus Mini Kit.
 
Contributor(s) Li W
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Submission date Sep 04, 2014
Last update date Jan 12, 2017
Contact name Wenlin Li
E-mail(s) liwenlin@smmu.edu.cn
Organization name Second Military Medical University
Street address 800 Xiangyin Road
City Shanghai
ZIP/Postal code 200433
Country China
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (2)
GSM1496952 eHBs Passage 5
GSM1496953 eHBs Passage 20
Relations
BioProject PRJNA260284

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61119_RAW.tar 18.7 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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