|
| Status |
Public on Feb 12, 2015 |
| Title |
Changes in DNaseI hypersensitivity upon ultradian (pulsed) hormone stimulation [Dnase-seq] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We report changes in DNaseI accessibility genome-wide upon treatment with corticosterone (Cort) for 20 minutes, treatment with Cort for 20 minutes followed by hormone withdrawal for 40 minutes, 60 minutes continuous stimulation with Cort, as well as Mock treatments for the aforementioned conditions.
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| |
|
| Overall design |
We examine DNaseI accessibility genome-wide upon following treatments: 0' Cort, 20' Cort, 60' Cort Pulsed, 60' Cort Constant, as well as Mock treatments simulating 0' Cort, 20' Cort, 60' Cort Pulsed, 60' Cort Constant.
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| |
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| Contributor(s) |
Stavreva DA, Hager GL, Baek S, Sung M |
| Citation(s) |
25677181 |
| Submission date |
Sep 09, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Songjoon Baek |
| Organization name |
NCI / NIH
|
| Department |
CCR
|
| Lab |
LRBGE
|
| Street address |
41 Library Drive
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9185 |
Illumina Genome Analyzer (Mus musculus) |
|
| Samples (12)
|
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| This SubSeries is part of SuperSeries: |
| GSE61236 |
Chromatin dynamics and gene regulation by GR |
|
| Relations |
| BioProject |
PRJNA260571 |
| SRA |
SRP046691 |
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