|
| Status |
Public on May 21, 2015 |
| Title |
Genome-wide Definition of Promoter and Enhancer Usage During Neural Induction of Human Embryonic Stem Cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
25978676 |
| Submission date |
Sep 09, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Silvio Bicciato |
| E-mail(s) |
silvio.bicciato@unipd.it
|
| Phone |
+39-049-827-6108
|
| Organization name |
University of Padova
|
| Department |
Molecular Medicine
|
| Street address |
via U. Bassi 59/b
|
| City |
Padova |
| ZIP/Postal code |
35131 |
| Country |
Italy |
| |
|
| Platforms (2) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
| GPL19171 |
Affymetrix GeneChip Human Genome U133 Array Set HG-U133 Plus2 based on a custom CDF (GeneAnnot version 2.2.0) |
|
| Samples (10)
|
| GSM1501174 |
Level 2 promoters in human ESCs and NESCs |
| GSM1501175 |
ChIP-Seq analysis of H3K4me1 in human neuroepithelial-like stem cells (NESCs) |
| GSM1501176 |
ChIP-Seq analysis of H3K4me3 in human neuroepithelial-like stem cells (NESCs) |
| GSM1501177 |
input (no Ab) |
| GSM1501178 |
Human embryonic stem cells (H9), replicate A |
| GSM1501179 |
Human embryonic stem cells (H9), replicate B |
| GSM1501180 |
Human embryonic stem cells (H9), replicate C |
| GSM1501181 |
ESC-derived neural precursors, replicate A |
| GSM1501182 |
ESC-derived neural precursors, replicate B |
| GSM1501183 |
ESC-derived neural precursors, replicate C |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE61264 |
Genome-wide Definition of Promoter and Enhancer Usage During Neural Induction of Human Embryonic Stem Cells [CAGE-seq] |
| GSE61265 |
Genome-wide Definition of Promoter and Enhancer Usage During Neural Induction of Human Embryonic Stem Cells [ChIP-seq] |
| GSE61266 |
Genome-wide Definition of Promoter and Enhancer Usage During Neural Induction of Human Embryonic Stem Cells [gene expression profile] |
|
| Relations |
| BioProject |
PRJNA260621 |
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