NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE61560 Query DataSets for GSE61560
Status Public on Sep 19, 2014
Title Gene expression analysis of CD11c+ splenic DCs day 7 after allo-HSCT.
Organism Mus musculus
Experiment type Expression profiling by array
Summary The goal of our study is to determine whether Atg16L1 deficiency leads to differences in the transcriptional profile of CD11c+ Dendritic Cells, ultimately leading to an increased inflammatory phenotype.
 
Overall design CD11c+ cell sorted splenic DCs were isolated from 8 week old WT and Atg16L1 hypomorphic mice from spleens of allo-HSCT recipients on day 7 were placed directly into TRIzol LS (Invitrogen). mRNA was isolated, amplified, and hybridized to an Affymetrix GeneChip (MOE430A).
 
Contributor(s) Vanessa H, Ken C
Citation(s) 25308334
Submission date Sep 18, 2014
Last update date May 04, 2018
Contact name Vanessa Marie Hubbard-Lucey
E-mail(s) vmhubbard@gmail.com
Organization name NYU School of Medicine
Department Microbiology
Lab Ken Cadwell
Street address 540 First Ave
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL8321 [Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array
Samples (7)
GSM1508227 WT1 YS1_WT1_Mouse430A
GSM1508228 WT2 YS2_WT2_Mouse430A
GSM1508229 WT3 YS3_WT3_Mouse430A
This SubSeries is part of SuperSeries:
GSE61561 CD11c+ splenic DCs
Relations
BioProject PRJNA261455

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61560_RAW.tar 12.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap