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Series GSE6290 Query DataSets for GSE6290
Status Public on Nov 18, 2006
Title Gene expression profiles of components isolated from developing kidney at E11.5, E12.5 & E15.5 using LCM. (GUDMAP Series ID: 10)
Organism Mus musculus
Experiment type Expression profiling by array
Summary The long term objective is to create an encyclopedia of the expression levels of all genes in multiple components of the developing kidney. The central thesis is straightforward. The combination of laser capture microdissection (LCM) plus microarray analysis offers a powerful, efficient and effective method for the creation of a global gene expression atlas of the developing kidney. Microarrays with essentially complete genome coverage can be used to quantitate expression levels of every gene in laser capture microdissected components of the developing kidney. The ensuing rapid read-out provides an expression atlas that is more sensitive, more economical and more complete than would be possible by in situ hybridizations alone.
Keywords: Comparison of kidney components.
 
Overall design At different developmental time points we isolate discrete elements of the kidney by using laser capture microdissection and then define their gene expression profiles with microarrays.
 
Contributor(s) Potter S, Brunskill E
Citation(s) 19501082
Submission date Nov 15, 2006
Last update date Feb 11, 2019
Contact name GUDMAP Developers
E-mail(s) gudmap-db@gudmap.org
Phone +44 131 651 8500
Organization name IGMM MRC Human Genetics Unit
Lab GUDMAP Database Group
Street address Crewe Road
City Edinburgh
ZIP/Postal code EH4 2XU
Country United Kingdom
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (37)
GSM144585 2_RV_6_6_05
GSM144586 3_RV_6_6_05
GSM144587 WT_RV_5_11
Relations
BioProject PRJNA100599

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE6290_RAW.tar 133.1 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file

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