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Series GSE6322 Query DataSets for GSE6322
Status Public on Nov 21, 2006
Title Screening for differentially expressed genes in patients with a novel immunodeficiency syndrome
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Lysosome-related organelles have versatile functions including protein and lipid degradation, signal transduction, and protein secretion. The molecular elucidation of rare congenital diseases affecting endosomal/lysosomal biogenesis has given insights into physiological functions of the innate and adaptive immune system.. Here, we describe a novel human primary immunodeficiency disorder and provide evidence that the endosomal adaptor protein p14, previously characterized as confining mitogen-activated-protein-kinase (MAPK) signaling to late endosomes, is critical for the function of neutrophils, B-cells, cytotoxic T-cells and melanocytes. Combining genetic linkage studies and transcriptional profiling analysis, we identified a homozygous point mutation in the 3’ UTR of p14 (also known as MAPBPIP), resulting in decreased protein expression. In p14-deficient cells, the distribution of late endosomes was severely perturbed, suggesting a novel role for p14 in endosomal biogenesis. These findings have implications for understanding endosomal membrane dynamics, compartmentalization of cell signal cascades, and their role in immunity.
Keywords: Interindividual comparison
 
Overall design EBV-transformed B cell lines from 2 parents and 2 affected children
 
Contributor(s) Bohn G, Geffers R, Klein C
Citation(s) 17195838
Submission date Nov 20, 2006
Last update date Aug 10, 2018
Contact name Robert Geffers
E-mail(s) robert.geffers@helmholtz-hzi.de
Phone +49 531-6181-3058
Organization name HCI - Helmholtz Centre for Infection Research
Department Dep. Molecular Bacteriology
Lab Genome Analytics
Street address Inhoffenstr. 7
City Braunschweig
ZIP/Postal code 38124
Country Germany
 
Platforms (1)
GPL96 [HG-U133A] Affymetrix Human Genome U133A Array
Samples (4)
GSM146336 child #12
GSM146337 Father #1
GSM146338 child #13
Relations
BioProject PRJNA100585

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Supplementary file Size Download File type/resource
GSE6322_RAW.tar 13.8 Mb (http)(custom) TAR (of CEL)

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