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Series GSE63773 Query DataSets for GSE63773
Status Public on Dec 03, 2014
Title NF-κB-direct activation of microRNAs with repressive effects on monocyte-specific genes is critical for osteoclast differentiation
Organism Homo sapiens
Experiment type Expression profiling by RT-PCR
Summary In this study, analysis of miRNA expression changes in osteoclast differentiation from human primary monocytes revealed the rapid upregulation of two miRNA clusters, miR-212/132 and miR-99b/let-7e/125a. We demonstrate that they negatively target monocyte-specific and immunomodulatory genes like TNFAIP3, IGF1R and IL15. Depletion of these miRNAs inhibits osteoclast differentiation and upregulates their targets. These miRNAs are also upregulated in other inflammatory monocytic differentiation processes. Most importantly, we demonstrate for the first time the direct involvement of Nuclear Factor kappa B (NF-κB) in the regulation of these miRNAs, as well as with their targets, whereby NF-κB p65 binds the promoters of these two miRNA clusters and NF-κB inhibition or depletion results in impaired upregulation of their expression.
 
Overall design Human primary CD14+ cells isolated from three different donors, and differentiated into osteoclast with MCSF and RANKL for 21 days. miRNA expression analyzed in paired samples at day 0, 2 and 21
 
Contributor(s) de la Rica L, García-Gómez A, Comet NR, Rodríguez-Ubreva J, Ciudad L, Vento-Tormo R, Company C, Álvarez-Errico D, García M, Gómez-Vaquero C, Ballestar E
Citation(s) 25601191
Submission date Dec 02, 2014
Last update date Jan 30, 2015
Contact name Esteban Ballestar
Organization name Josep Carreras Research Institute (IJC)
Lab Epigenetics and Immune Disease
Street address Ctra de Can Ruti, Camí de les Escoles s/n
City Badalona, Barcelona
State/province N/A = Not Applicable
ZIP/Postal code 08916
Country Spain
 
Platforms (1)
GPL18510 microRNA Ready-to-use PCR, Human panel I+II, V2.R
Samples (9)
GSM1556931 Donor1, CD14+ Monocytes
GSM1556932 Donor2, CD14+ Monocytes
GSM1556933 Donor3, CD14+ Monocytes
Relations
BioProject PRJNA269054

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Supplementary file Size Download File type/resource
GSE63773.xls.gz 80.2 Kb (ftp)(http) XLS
Processed data are available on Series record

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