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Series GSE66005 Query DataSets for GSE66005
Status Public on Feb 28, 2017
Title Ph-like acute lymphoblastic leukemia in adults is characterized by IgH-CRFL2 and JAK2 mutations and poor prognosis [HG-U133B]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Philadelphia-like B-cell precursor acute lymphoblastic leukemia (Ph-like ALL) is characterized by distinct genetic alterations and inferior prognosis in children and younger adults. The purpose of this study was the genetic and clinical characterization of Ph-like ALL in adults. Among 207 adult B-cell precursor ALL patients, 26 (13%) were classified as Ph-like using Affymetrix microarrays. The incidence of this subtype was 25% among 105 B-cell precursor ALL patients negative for BCR-ABL1 and MLL-translocations (B-other). All patients with IgH-CRLF2 translocation (38% vs 0%; p=0.002) or mutations in JAK2 (44% vs. 0%; p<0.001) were exclusively found in the Ph-like subgroup. Clinical and outcome analyses were restricted to patients treated within GMALL trials 06/99 and 07/03 (n=107). The complete remission (CR) rate after induction was 100% for Ph-like (n=19) and B-other patients (n=40). After induction, significantly fewer Ph-like patients reached molecular CR (33% vs 79%; p=0.01). At 5 years, the Ph-like ALL subgroup had a lower probability of continuous CR (24% vs 62%; p<0.001) and overall survival (22% vs 64%; p=0.006) compared to B-other ALL patients. Subsequent analysis led to a clinically applicable algorithm identifying this patient subset with a specificity of 100%. Our study is the first to demonstrate that the profile of genetic events in adult Ph-like ALL resembles pediatric Ph-like ALL and differs from B-other ALL. The Ph-like phenotype associates with inferior outcomes in intensively treated adult ALL patients. Ph-like adult ALL should be recognized as a distinct, high-risk entity and further research on improved diagnostic and therapeutic approaches is needed.
 
Overall design Analysis of 207 samples of bone marrow mononuclear cells (98 Affymetrix HG-U133 2.0 Plus Chip; 109 Affymetrix HG-U133 A&B Set) from adult patients with acute lymphoblastic leukemia (ALL).
 
Contributor(s) Herold T, Neumann M, Schneider S, Metzeler KH, Jurinovic V, Konstandin NP, Bohlander S, Mansmann U, Hiddemann W, Dreyling M, Baldus CD, Spiekermann K
Citation(s) 27561722
Submission date Feb 17, 2015
Last update date Aug 10, 2018
Contact name Tobias Herold
E-mail(s) tobias.herold@med.uni-muenchen.de
Organization name University Hospital Grosshadern, Ludwig-Maximilians-University (LMU)
Department Department of Internal Medicine III
Street address Marchioninistr. 15
City Munich
ZIP/Postal code 81377
Country Germany
 
Platforms (1)
GPL97 [HG-U133B] Affymetrix Human Genome U133B Array
Samples (109)
GSM1612650 ALL_patient_1 [HG-U133B]
GSM1612651 ALL_patient_2 [HG-U133B]
GSM1612652 ALL_patient_3 [HG-U133B]
This SubSeries is part of SuperSeries:
GSE66006 Ph-like acute lymphoblastic leukemia in adults is characterized by IgH-CRFL2 and JAK2 mutations and poor prognosis
Relations
BioProject PRJNA276459

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66005_RAW.tar 382.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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