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Series GSE66843 Query DataSets for GSE66843
Status Public on Jun 28, 2021
Title A cell-based model unravels drivers for hepatocarcinogenesis and targets for clinical chemoprevention
Organisms Homo sapiens; Rattus norvegicus; Hepacivirus hominis
Experiment type Expression profiling by array
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34535664
Submission date Mar 12, 2015
Last update date Jun 29, 2022
Contact name Yujin Hoshida
E-mail(s) Yujin.Hoshida@UTSouthwestern.edu
Organization name University of Texas Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platforms (7)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
GPL17230 NanoString Prognostic Liver Signature (PLS) panel (186 genes, ver.0)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (265)
GSM1633141 Control_to_HCV10^3-5/ml_1
GSM1633142 Control_to_HCV10^3-5/ml_2
GSM1633143 Control_to_HCV10^3-5/ml_3
This SuperSeries is composed of the following SubSeries:
GSE66841 Gene expression profiles of Huh7.5.1 and HepG2 cells infected with HCV, HBV, HDV, and alcohol, and clinical liver tissues treated with various compounds of co-culture with LX2 cells
GSE66842 Gene expression profiles of differentiated Huh7.5.1 cells infected with HCV Jc1 clone
GSE81040 High-throughput single-cell RNA-Seq profiling of DMSO-differentiated Huh7.5.1 undergoing or not long-term HCV infection
Relations
BioProject PRJNA278071

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66843_RAW.tar 26.2 Mb (http)(custom) TAR
SRA Run SelectorHelp
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