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Series GSE66992 Query DataSets for GSE66992
Status Public on Oct 26, 2015
Title ChIP-seq of H3K27ac in lung cancer, endometrial carcinoma and head and neck squamous cell carcinoma cells.
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Using H3K27ac ChIP-seq profile to map active enhancers in lung cancer, endometrial carcinoma and head and neck squamous cell carcinoma cells
 
Overall design ChIP-seq of H3K27ac was done in lung adenocarcinoma cell lines (NCI-H358 and NCI-H2009), squamous cell lung carcinoma cell lines (HCC95), endometrial carcinoma cell lines (Ishikawa) and head and neck squamous cell lines (BICR-31)
 
Contributor(s) Zhang X, Watanabe H
Citation(s) 26656844
Submission date Mar 17, 2015
Last update date May 15, 2019
Contact name Xiaoyang Zhang
Organization name University of Utah
Lab Zhang lab
Street address 1950 CIrcle of Hope
City Salt Lake City
ZIP/Postal code 84112
Country USA
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (12)
GSM1635574 H358_K27ac_Rep1
GSM1635575 H358_K27ac_Rep2
GSM1635576 H2009_K27ac_Rep1
This SubSeries is part of SuperSeries:
GSE72002 Enhancers
Relations
BioProject PRJNA278653
SRA SRP056244

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66992_RAW.tar 5.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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