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Series GSE67404 Query DataSets for GSE67404
Status Public on Feb 05, 2016
Title Foxc1 reinforces quiescence in hair follicle stem cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Quiescent stem cells are periodically activated to maintain tissue homeostasis or occasionally called into action upon injury. Molecular mechanisms that constitutively maintain stem cell identity or promote stem cell proliferation and differentiation upon activation have been extensively studied. However, it is unclear how quiescent stem cells maintain identity and reinforce quiescence when they transition from quiescence to activation. Here we show mouse hair follicle stem cell compartment induces a transcription factor, Foxc1, when activated. Importantly, deletion of Foxc1 in the activated but not quiescent stem cells compromises stem cell identity, fails to re-establish quiescence and subsequently drives premature stem cell activation.These findings uncover a dynamic, cell-intrinsic mechanism employed by hair follicle stem cells to reinforce stemness in response to activation.
 
Overall design Poly(A)-enriched transcriptome RNA-seq on HFSCs isolated in WT and K14Cre cKO mice at anagen and early telogen stage of hair cycle.
 
Contributor(s) Wang L, Siegenthaler JA, Dowell RD, Yi R
Citation(s) 26912704
Submission date Mar 30, 2015
Last update date May 15, 2019
Contact name Li Wang
E-mail(s) li.wang@colorado.edu
Phone 3037045961
Organization name University of Colorado, Boulder
Street address 347 UCB
City Boulder
State/province CO
ZIP/Postal code 80303
Country USA
 
Platforms (2)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM1646352 P29_KO_HFSC
GSM1646353 P29_WT_HFSC
GSM1646354 P30_WT_HFSC
Relations
BioProject PRJNA279836
SRA SRP056668

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67404_P30_HTseq_count.txt.gz 280.8 Kb (ftp)(http) TXT
GSE67404_P47_HTseq_count.txt.gz 305.4 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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