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GEO accession:
Series GSE67458
Query DataSets for GSE67458
Status
Public on Jul 01, 2015
Title
The MEF2B Regulatory Network
Organism
Homo sapiens
Experiment type
Expression profiling by array
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
26245647
Submission date
Mar 31, 2015
Last update date
May 15, 2019
Contact name
Patrick Plettner
E-mail(s)
pplettner@bcgsc.ca
Organization name
BC Cancer Agency GSC
Street address
100-570 West 7th Avenue
City
Vancouver
State/province
BC
ZIP/Postal code
V5Z 4S6
Country
Canada
Platforms (2)
GPL5175
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
Samples (55)
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GSM1646518
WT_DMSO 1
GSM1646519
WT_DMSO 2
GSM1646520
WT_DMSO 3
GSM1646521
WT_iono 1
GSM1646522
WT_iono 2
GSM1646523
WT_iono 3
GSM1646524
untrans_DMSO 1
GSM1646525
untrans_DMSO 2
GSM1646526
untrans_DMSO 3
GSM1646527
untrans_iono 1
GSM1646528
untrans_iono 2
GSM1646529
untrans_iono 3
GSM1646530
K4E_DMSO 1
GSM1646531
K4E_DMSO 2
GSM1646532
K4E_DMSO 3
GSM1646533
Y69H_DMSO 1
GSM1646534
Y69H_DMSO 2
GSM1646535
Y69H_DMSO 3
GSM1646536
D83V_DMSO 1
GSM1646537
D83V_DMSO 2
GSM1646538
D83V_DMSO 3
GSM1647127
WT-MEF2B-V5-RNAseq-DMSO
GSM1647128
K4E-MEF2B-V5-RNAseq-DMSO
GSM1647129
Y69H-MEF2B-V5-RNAseq-DMSO
GSM1647130
D83V-MEF2B-V5-RNAseq-DMSO
GSM1647131
empty-vector-RNAseq-DMSO
GSM1647132
WT-MEF2B-V5-RNAseq-iono
GSM1647133
K4E-MEF2B-V5-RNAseq-iono
GSM1647134
Y69H-MEF2B-V5-RNAseq-iono
GSM1647135
D83V-MEF2B-V5-RNAseq-iono
GSM1647136
empty-vector-RNAseq-iono
GSM1647184
WT-MEF2B-V5-ChIP-rep1
GSM1647185
WT-MEF2B-V5-ChIP-rep2
GSM1647186
K4E-MEF2B-V5-ChIP-rep1
GSM1647187
K4E-MEF2B-V5-ChIP-rep2
GSM1647188
D83V-MEF2B-V5-ChIP-rep1
GSM1647189
D83V-MEF2B-V5-ChIP-rep2
GSM1647190
WT-MEF2B-V5-ChIP-input-rep1
GSM1647191
WT-MEF2B-V5-ChIP-input-rep2
GSM1647192
K4E-MEF2B-V5-ChIP-input-rep1
GSM1647193
K4E-MEF2B-V5-ChIP-input-rep2
GSM1647194
D83V-MEF2B-V5-ChIP-input-rep1
GSM1647195
D83V-MEF2B-V5-ChIP-input-rep2
GSM1647364
WT-MEF2B-H3K27ac-ChIP-rep1
GSM1647365
WT-MEF2B-H3K27ac-ChIP-rep2
GSM1647366
empty-vector-H3K27ac-ChIP-rep1
GSM1647367
empty-vector-H3K27ac-ChIP-rep2
GSM1647368
WT-MEF2B-H3K4me3-ChIP-rep1
GSM1647369
WT-MEF2B-H3K4me3-ChIP-rep2
GSM1647370
empty-vector-H3K4me3-ChIP-rep1
GSM1647371
empty-vector-H3K4me3-ChIP-rep2
GSM1647372
WT-MEF2B-input-control-rep1
GSM1647373
WT-MEF2B-input-control-rep2
GSM1647374
empty-vector-input-control-rep1
GSM1647375
empty-vector-input-control-rep2
This SuperSeries is composed of the following SubSeries:
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GSE67417
The MEF2B Regulatory Network - Expression microarray data
GSE67447
The MEF2B Regulatory Network - RNA-seq data
GSE67450
The MEF2B Regulatory Network - MEF2B-V5 ChIP-seq data
GSE67455
The MEF2B Regulatory Network - H3K27ac and H3K4me3 ChIP-seq data
Relations
BioProject
PRJNA279981
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE67458_RAW.tar
1.1 Gb
(http)
(custom)
TAR (of CEL, NARROWPEAK, TXT)
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