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Series GSE68239 Query DataSets for GSE68239
Status Public on Apr 01, 2017
Title Compartment-specific investigation of differential gene expression profiles in lungs with idiopathic pulmonariy fibrosis (IPF)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Lung tissues were collected from patients with IPF undergoing lung transplantation. Non-transplanted donor lung tissue showing no evidence of interstitial lung disease served as healthy controls. Septa from different regions of the lungs were mircodissected and their RNA was subjected to microarray-analysis. RNA from 10 heathy donor tissues was pooled and used as a pooled reference. From each of the 10 IPF patients, samples were collected once from “healthy looking” (non-fibrotic) regions and from fibrotic loci.
 
Overall design Two-color design, 3 groups: one pooled healthy control sample (from n=10 patients), 10 samples from septa from normal and from fibrotic of n=10 patients.
 
Contributor(s) Wilhelm J, Fink L, Andreas G
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Submission date Apr 24, 2015
Last update date Apr 02, 2017
Contact name Jochen Wilhelm
Organization name Justus-Liebig University Giessen
Department Institute for Lung Health
Lab ILH Genomics
Street address Aulweg 132
City Giessen
State/province Hessen
ZIP/Postal code 35392
Country Germany
 
Platforms (1)
GPL1708 Agilent-012391 Whole Human Genome Oligo Microarray G4112A (Feature Number version)
Samples (20)
GSM1666156 F_24A
GSM1666157 F_43B
GSM1666158 F_45B
Relations
BioProject PRJNA282125

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68239_RAW.tar 121.0 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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