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Series GSE6829 Query DataSets for GSE6829
Status Public on Jan 22, 2007
Title Group II-A WRKY transcription factors and early leaf senescence
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary In our laboratory we are interested in studying the functions of WRKY zinc finger type transcription factors. There are 74 members of this gene family in Arabidopsis. WRKY factors are key regulators of distinct plant defense responses and are involved in certain developmental programs e.g. trichome development and plant leaf senescence. We would like to determine the functions of a small sub-group (group II-a) of WRKY factors in response to bacterial infection. Our aim is to compare and contrast the gene expression profiles of 3-week-old wild type and WRKY T-DNA knockout mutants grown in a growth chamber under long day growth conditions and subsequently challenged for 6 hours with the virulent bacterial pathogen /Pseudomonas syringae/ DC3000.
Experimenter name: Bekir Uelker
Experimenter phone: 49-221-5062-310
Experimenter fax: 49-221-5062-353
Experimenter department: Somsissich Lab
Experimenter institute: Max-Planck-Institute for Plant Breeding Research
Experimenter address: Department of Plant Microbe Interactions
Experimenter address: Carl-von-Linne-Weg 10
Experimenter address: Cologne
Experimenter zip/postal_code: 50829
Experimenter country: Germany
Keywords: genetic_modification_design
 
Overall design 7 samples were used in this experiment
 
Contributor(s) Uelker B, Somssich I, Townsend H, Emmerson Z, Schildknecht B
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Submission date Jan 22, 2007
Last update date Aug 28, 2018
Contact name Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s) affy@arabidopsis.info
Phone +44 (0)115 951 3237
Fax +44 (0)115 951 3297
URL http://arabidopsis.info/
Organization name Nottingham Arabidopsis Stock Centre (NASC)
Department School of Biosciences, University of Nottingham
Street address Sutton Bonington Campus
City Loughborough
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (7)
GSM157358 Ulker_2-1_WT-Col-0-L-MgCl2_Rep1_ATH1
GSM157359 Ulker_2-2_WRKY-KO-02-Pst-DC3000_Rep1_ATH1
GSM157360 Ulker_2-3_WRKY-KO-07-Pst-DC3000_Rep1_ATH1
Relations
BioProject PRJNA99153

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE6829_RAW.tar 15.4 Mb (http)(custom) TAR (of CEL)

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