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Series GSE69618 Query DataSets for GSE69618
Status Public on Jun 06, 2015
Title An orthologous epigenetic gene expression signature derived from differentiating embryonic stem cells identifies regulators of cardiogenesis
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report a time course of RNA-seq data from wild-type embryonic stem cells and embryonic stem cells in which the cardiogenic transcription factors ZNF503, ZEB2 and NKX2-5 are depleted with shRNAs differentiating along the cardiac lineage.
 
Overall design Biological replicates of RNA-seq data from embryonic stem cells differentiating along the cardiac lineage.
 
Contributor(s) Busser BW
Citation(s) 26485529
Submission date Jun 05, 2015
Last update date May 15, 2019
Contact name Brian Busser
Organization name NHLBI/NIH
Lab LDSB
Street address 10 Center Drive
City Bethesda
State/province Md
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (34)
GSM1704782 H1-NKX2-5-shRNA-day0-Rep1
GSM1704783 H1-NKX2-5-shRNA-day0-Rep2
GSM1704784 H1-ZEB2-shRNA-day0-Rep1
Relations
BioProject PRJNA285991
SRA SRP059197

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69618_raw_reads.txt.gz 2.2 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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