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| Status |
Public on May 26, 2016 |
| Title |
RNAseq in E18.5 wild-type, Nova2-KO, and Nova1-KO mouse cortex and mid- and hind-brain |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We sequenced mRNA from E18.5 mouse cortex (3 wild-type vs 3 Nova2-/- and 3 wild-type vs 3 Nova1-/-) and from E18.5 mouse mid- and hind-brain (3 wild-type vs 3 Nova1-/-) to compare gene expression level and alternative splicing events between wild-type and Nova mutant mice.
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| |
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| Overall design |
Mouse cortex or mid- and hind-brain mRNA profiles of embryonic 18.5 day wild type (WT), Nova2-/-, and Nova1-/- mice were generated by deep sequencing using Illumina Hiseq2500.
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| |
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| Contributor(s) |
Saito Y, Darnell RB |
| Citation(s) |
27223325 |
| Submission date |
Jun 09, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Yuhki Saito |
| E-mail(s) |
ysaito@rockefeller.edu
|
| Organization name |
The Rockefeller University
|
| Lab |
Laboratory of Molecular Neuro-oncology
|
| Street address |
1230 York avenue
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10065 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
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| Samples (18)
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| This SubSeries is part of SuperSeries: |
| GSE69711 |
Nova HITS-CLIP and RNA-Seq in mouse cortex |
|
| Relations |
| BioProject |
PRJNA286236 |
| SRA |
SRP059295 |
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