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Series GSE69869 Query DataSets for GSE69869
Status Public on Jul 15, 2015
Title Study of gene expression changes in TH-MYCN murine neuroblastomas in response to 24hr of panobinostat treatment
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Neuroblastoma is the most common extra-cranial malignancy in childhood and accounts for approximately 15% of childhood cancer deaths. Amplification of N-Myc in neuroblastoma is associated with aggressive disease and predicts for poor prognosis. Novel therapeutic approaches are therefore essential to improving patient outcomes in this setting. The histone deacetylases are known to interact with N-Myc and regulate numerous cellular processes, including differentiation in neuroblastoma. We therefore investigated the antitumor activity of the histone deacetylase inhibitor, panobinostat in the setting of N-Myc amplified neuroblastoma using the TH-MYCN murine model. Continuous treatment of tumor bearing TH-MYCN transgenic mice with panobinostat for 9 weeks led to a significant improvement in survival as compared to mice treated with vehicle, or continuous treatment with panobinostat for a three week period. Panobinostat induced rapid tumor regression with no regrowth observed during the treatment period. Tumor response was associated with an initial apoptosis phenotype mediated via up-regulation of BMF and BIM. When treated was stopped at three weeks 100% of mice relapsed with aggressive neuroblastoma. Differentiation of neuroblastoma into benign ganglioneuroma, with a characteristic increase in S100 expression and reduction of N-Myc expression, was observed in mice treated for nine weeks, resulting in a sustained remission on 90% of mice treated. RNA-sequencing analysis of tumors from treated animals confirmed significant up-regulation of gene pathways associated with apoptosis and differentiation as early as 24 hours after treatment. Together our data demonstrate the potential of panobinostat as a therapeutic strategy for high-risk neuroblastoma patients.
 
Overall design Eight homozygous TH-MYCN mice bearing neuroblastomas were treated with either 5mg/kg panobinostat (4 animals) or vehicle (4 animals) for 24hr (two doses) and tumours harvested 4hr post the second dose.
 
Contributor(s) Waldeck K, Cullinane C, Ardley K, Shortt J, Martin B, Tothill RW, Li J, Johnstone RW, McArthur GA, Hicks RJ, Wood PJ
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Submission date Jun 15, 2015
Last update date May 15, 2019
Contact name Paul James Wood
E-mail(s) Paul.Wood@petermac.org
Phone 61396561517
Organization name Peter MacCallum Cancer Centre
Department Translational Research Laboratory
Street address 2 St. Andrews Place
City East Melbourne
State/province Victoria
ZIP/Postal code 3002
Country Australia
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (8)
GSM1711521 1 - H17-Control
GSM1711522 2 - H43-Control
GSM1711523 3 - H59-Control
Relations
BioProject PRJNA287006
SRA SRP059492

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69869_log_dig_matrix.txt.gz 741.4 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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