|
| Status |
Public on Jun 25, 2018 |
| Title |
RNA-seq of cytosolic and chromatin-associated transcripts following TNFα and Spt5 KD |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We examined the effects of TNFα and Spt5, the major DSIF subunit, on nascent and mature transcripts using RNA-Seq of chromatin-associated and cytoplasmic transcripts.
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| |
|
| Overall design |
RNA was extracted from the cytosolic and chromatin fractions of control and Spt5 KD cells that were treated with TNFα for 1 hour
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| |
|
| Contributor(s) |
Diamant G, Dikstein R |
| Citation(s) |
26903558 |
| Submission date |
Jun 25, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Rivka Dikstein |
| E-mail(s) |
rivka.dikstein@weizmann.ac.il
|
| Organization name |
The Weizmann Institute of Science
|
| Street address |
2 Hertzl st.
|
| City |
Rehovot |
| ZIP/Postal code |
76100 |
| Country |
Israel |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (8)
|
|
| Relations |
| BioProject |
PRJNA288134 |
| SRA |
SRP059880 |
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