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| Status |
Public on Nov 25, 2015 |
| Title |
The acute cold response of brown adipose tissue analyzed by RNA-seq |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We applied RNA sequencing (RNA-seq) to map the global changes in gene expression of interscapular brown adipose tissue (iBAT) of mice subjected to acute cold exposure for 3 days. Here we find extensive changes in the iBAT transcriptome in response to cold with a prominent induction of genes associated to lipid-related metabolic processes.
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| Overall design |
RNA-seq of poly-A enriched RNA isolated from brown adipose tissue of 5 mice housed at room temperature (22°C) and 5 mice exposed to cold (4°C) for 3 days.
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| Contributor(s) |
Marcher A, Loft A, Mandrup S |
| Citation(s) |
26628366 |
| Submission date |
Jul 01, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Anne Loft |
| E-mail(s) |
anlo@bmb.sdu.dk
|
| Organization name |
University of Southern Denmark
|
| Department |
Biochemistry & Molecular Biology
|
| Street address |
Campusvej 55
|
| City |
Odense M |
| ZIP/Postal code |
5230 |
| Country |
Denmark |
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| Platforms (1) |
| GPL18480 |
Illumina HiSeq 1500 (Mus musculus) |
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| Samples (10)
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| Relations |
| BioProject |
PRJNA288697 |
| SRA |
SRP060228 |
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