|
| Status |
Public on Feb 05, 2016 |
| Title |
Identifying DEK-dependent transcriptional signatures in HPV+ and HPV- head and neck squamous cell carcinoma (HNSCC) |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report the first RNA-Seq experiments profiling the effects of DEK loss in HNSCC. Our data also incorporates HPV+ and HPV- tumors to idenfity HPV-dependent and -independent gene signatures.
|
| |
|
| Overall design |
RNA-Seq of DEK-dependent gene signatures in HNSCC cell lines
|
| |
|
| Contributor(s) |
Adams A, Wells S |
| Citation(s) |
26527316 |
| Submission date |
Jul 01, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Susanne Wells |
| E-mail(s) |
susanne.wells@cchmc.org
|
| Organization name |
Cincinnati Children's Hospital Medical Center
|
| Street address |
3333 Burnet Ave.
|
| City |
Cincinnati |
| State/province |
Ohio |
| ZIP/Postal code |
45229 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA288722 |
| SRA |
SRP060234 |
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