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| Status |
Public on Sep 01, 2018 |
| Title |
Replicated transcriptome profiling of Normal and Cancerous Prostate Cells [RNA-Seq] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To identify differentially expressed transcripts in Cancer and Normal Prostate cells global transcript abundance was assayed by replicated (n=3) stranded RNA-Sequencing
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| Overall design |
PolyA+ RNA profiles of LNCaP (n=3) and PrEC (n=3) cell lines were generated by deep sequencing. Libraries were generated by Illumina TruSeq kits (maintaining strand information). The resultant cDNA libraries were sequenced at the Kinghorn Center for Clinical Genomics (The Garvan Institute of Medical Research, Darlinghurst, NSW, Australia) using the Illumina HiSeq 2500 platform.
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| |
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| Contributor(s) |
French HJ, Gould K, Clark S, Valdes Mora F, Song JZ, Skulte K |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jul 02, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Timothy John Peters |
| E-mail(s) |
t.peters@garvan.org.au
|
| Phone |
+61292958325
|
| Organization name |
Garvan Institute of Medical Research
|
| Department |
Immunology
|
| Lab |
Immunogenomics
|
| Street address |
384 Victoria St
|
| City |
Darlinghurst |
| State/province |
NSW |
| ZIP/Postal code |
2010 |
| Country |
Australia |
| |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE62410 |
Transcriptome profiling of Normal and Cancerous Prostate Cells |
|
| Relations |
| BioProject |
PRJNA288751 |
| SRA |
SRP060235 |
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