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Series GSE7047 Query DataSets for GSE7047
Status Public on Feb 06, 2008
Title Transcriptome profile of Trypanosoma cruzi-infected cells
Platform organism Homo sapiens
Sample organisms Trypanosoma cruzi; Homo sapiens
Experiment type Expression profiling by array
Summary As Trypanosoma cruzi, the etiological agent of Chagas disease, multiplies in the cytoplasm of nucleated host cells, infection with this parasite is highly likely to affect host cells. We performed an exhaustive transcriptome analysis of T. cruzi-infected HeLa cells using an oligonucleotide microarray containing probes for greater than 47,000 human gene transcripts. In comparison with uninfected cells, those infected with T. cruzi showed greater than threefold up-regulation of 41 genes and greater than threefold down-regulation of 23 genes. Real-time reverse transcriptase-polymerase chain reaction (RT-PCR) of selected, differentially expressed genes confirmed the microarray data. Many of these up- and down-regulated genes were related to cellular proliferation, including seven up-regulated genes encoding proliferation inhibitors and three down-regulated genes encoding proliferation promoters, strongly suggesting that T. cruzi infection inhibits host cell proliferation, which may allow more time for T. cruzi to replicate and produce its intracellular nests. These findings provide new insight into the molecular mechanisms by which intracellular T. cruzi infection influences the host cell, leading to pathogenicity.
Keywords: infection response
 
Overall design Three replicates of infected and uninfected HeLa cell were analyzed. To examine the extent of cross hybridization between T. cruzi cRNA and Human chip, trypomastigote cRNA was hybridized with the same chip.
 
Contributor(s) Shigihara T, Hashimoto M, Shindo N, Aoki T
Citation(s) 18058129
Submission date Feb 16, 2007
Last update date Mar 25, 2019
Contact name Takako Shigihara
E-mail(s) siggy@med.juntendo.ac.jp
Organization name Juntendo University Graduate School of Medicine
Department Biomedical Research Center
Lab Division of Molecular and Biochemical Research
Street address 2-1-1, Hongo, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-8421
Country Japan
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (7)
GSM162953 HeLa_uninfected_rep1
GSM162955 HeLa_uninfected_rep2
GSM162964 HeLa_uninfected_rep3
Relations
BioProject PRJNA98507

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE7047_RAW.tar 33.5 Mb (http)(custom) TAR (of CEL, CHP)
Processed data provided as supplementary file

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