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| Status |
Public on Jul 30, 2016 |
| Title |
A comprehensive 30K microarray platform to test transcriptomic responses in Biomphalaria glabrata |
| Platform organisms |
Schistosoma mansoni; Biomphalaria glabrata; Echinostoma paraensei |
| Sample organism |
Biomphalaria glabrata |
| Experiment type |
Expression profiling by array
|
| Summary |
Transcriptional profiling of Biomphalaria snail (whole body tissues) comparing BS90 strain untreated with sterile wounding and septic injury using a new comprehensive microarray platform design. Goal was to compare responses to differen immune challenges within one strain.
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| |
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| Overall design |
Three-condition experiment one strain untreated vs. injury vs. septic injury, Biological replicates: 2 control replicates, 3 injured replicates, 2 septic injury replicates.
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| |
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| Contributor(s) |
Zhang S, Nolan JR, Rosenberg GH, Adema CM |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jul 17, 2015 |
| Last update date |
Aug 01, 2016 |
| Contact name |
Coen M Adema |
| E-mail(s) |
coenadem@unm.edu
|
| Phone |
505 277 2743
|
| Organization name |
University of New Mexico
|
| Department |
CETI Biology MSC03 2020
|
| Street address |
1 University of New Mexico
|
| City |
Albuquerque |
| State/province |
NM |
| ZIP/Postal code |
87131-0001 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL20708 |
Agilent-030447 UNMBIOCETI Biomphalaria glabrata 30K v1.0 |
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| Samples (7)
|
| GSM1826246 |
BS90 injury 12h biological replicate 2 |
| GSM1826247 |
BS90 injury 12h biological replicate 3 |
| GSM1826248 |
BS90 septic injury 12h biological replicate 1 |
| GSM1826249 |
BS90 septic injury 12h biological replicate 2 |
|
| Relations |
| BioProject |
PRJNA290195 |
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