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Series GSE72538 Query DataSets for GSE72538
Status Public on Sep 06, 2015
Title Amyloid protein-mediated differential DNA methylation status regulates gene expression in Alzheimer’s disease model cell line.
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of human neuroglioma cell line (H4) and the Swedish double mutant-harboring H4 cell line (H4-sw). The Illumina Infinium 27k Human DNA methylation Beadchip was used to obtain DNA methylation profiles across approximately 27,000 CpGs in 2 cell lines, H4 and H4-sw.
 
Overall design Bisulphite converted DNA from the H4 and H4-sw cells were hybridised to the Illumina Infinium 27k Human Methylation Beadchip
 
Contributor(s) Ahn J, Sung HY
Citation(s) 22001921
Submission date Aug 31, 2015
Last update date Dec 08, 2015
Contact name Hye Youn Sung
E-mail(s) hysung@ewha.ac.kr
Organization name Ewha Womens University
Department Biochemistry
Street address 911-1 Mok-dong
City Seoul
ZIP/Postal code 782-213
Country South Korea
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (2)
GSM1864276 genomic DNA from H4 cells
GSM1864277 genomic DNA from H4-sw cells
Relations
BioProject PRJNA294291

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE72538_RAW.tar 5.8 Mb (http)(custom) TAR
GSE72538_unmethylated_methylated.txt.gz 423.1 Kb (ftp)(http) TXT
Processed data included within Sample table

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