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Series GSE72966 Query DataSets for GSE72966
Status Public on Jul 22, 2016
Title Genome-wide microRNA expression induced by TNF
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We sequenced microRNAs from bone marrow derived macrophages derived from the control (WT) and RBP-J conditional knockout mice (RBP-J KO; Rbpjf/f; LysM Cre).
 
Overall design Examination of differential microRNA expression levels induced by TNF as well as regulated by RBP-J in bone marrow derived macrophages.
 
Contributor(s) Zhao B
Citation(s) 27183593
Submission date Sep 11, 2015
Last update date May 15, 2019
Contact name Baohong Zhao
E-mail(s) zhaob@hss.edu
Organization name Hospital for Special Surgery
Street address 535 E70th ST
City New York
ZIP/Postal code NY 10021
Country USA
 
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (8)
GSM1875570 WT without stimulation rep1
GSM1875571 RBP-J KO without stimulation rep 1
GSM1875572 WT with TNF for 24h rep1
Relations
BioProject PRJNA295436
SRA SRP063630

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE72966_miRNA-seq_rep1.xls.gz 15.9 Kb (ftp)(http) XLS
GSE72966_miRNA-seq_rep2.xls.gz 30.3 Kb (ftp)(http) XLS
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Raw data are available in SRA
Processed data are available on Series record

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