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Series GSE73294 Query DataSets for GSE73294
Status Public on Dec 31, 2015
Title Mdm2 enhances stemness-promoting chromatin modifications through the Polycomb Repressor Complex 2 in a p53-Independent Manner [HCT116 microarray]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The Mdm2 oncoprotein ubiquitinates and antagonizes p53 but may also carry out p53-independent functions. Here we report that Mdm2 is required for the efficient generation of induced pluripotent stem cells (iPSCs) from murine embryonic fibroblasts, in the absence of p53. Similarly, Mdm2 depletion in the context of p53 deficiency also promoted the differentiation of human mesenchymal stem cells and diminished clonogenic survival of cancer cells. Most of the Mdm2-controlled genes also responded to the inactivation of the Polycomb Repressor Complex 2 (PRC2) and its catalytic component EZH2. Mdm2 physically associated with EZH2 on chromatin, enhancing the trimethylation of Histone 3 at lysine 27 and the ubiquitination of Histone 2A at lysine 119 (H2AK119) at its target genes. Removing Mdm2 simultaneously with the H2AK119 E3 ligase Ring1B/RNF2 further induced these genes and synthetically arrested cell proliferation. In conclusion, Mdm2 supports the Polycomb-mediated repression of lineage specific genes independent of p53.
 
Overall design microarray analysis in HCT116 p53-/-cells
 
Contributor(s) Wienken M, Dobbelstein M
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Submission date Sep 22, 2015
Last update date Jan 09, 2018
Contact name Magdalena Wienken
Organization name University Medical Center Goettingen
Street address Justus-von-Liebig-Weg 11
City Goettingen
ZIP/Postal code 37077
Country Germany
 
Platforms (1)
GPL13497 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
Samples (6)
GSM1890233 HCT116p53null control kd
GSM1890234 HCT116p53null p53 kd
GSM1890235 HCT116p53null Mdm2 kd (1)
This SubSeries is part of SuperSeries:
GSE73602 Mdm2 enhances stemness-promoting chromatin modifications through the Polycomb Repressor Complex 2 in a p53-Independent Manner
Relations
BioProject PRJNA297412

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE73294_RAW.tar 12.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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