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| Status |
Public on Dec 11, 2015 |
| Title |
Genome wide identification of enhancer regions in the retrosplenial cortex of the prairie vole, Microtus ochrogaster. |
| Organism |
Microtus ochrogaster |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We use ChIP-seq targeting histone 3 lysine 4 mono-methylation (H3K4me1) to identify putative enhancer sites genome-wide, in the retrosplenial cortex of adult prairie vole males.
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| Overall design |
ChIP samples were generated by targeting a known enhancer mark (H3K4me1) in chromatin extracted from the retrosplenial cortex of 8 males. Illumina libraries were prepared from ChIP and INPUT DNA and sequenced on Illimuna HiSeq 2500 platform.
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| Contributor(s) |
Phelps SM, Okhovat M |
| Citation(s) |
26659055 |
| Submission date |
Oct 01, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Steven M Phelps |
| E-mail(s) |
sphelps@mail.utexas.edu
|
| Organization name |
University of Texas at Austin
|
| Department |
Integrative biology
|
| Lab |
Phelps
|
| Street address |
34 Patterson Labs, 2401 Speedway
|
| City |
Austin |
| State/province |
TX - Texas |
| ZIP/Postal code |
78712 |
| Country |
USA |
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| Platforms (1) |
| GPL20981 |
Illumina HiSeq 2500 (Microtus ochrogaster) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA297599 |
| SRA |
SRP064397 |
