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Series GSE74094 Query DataSets for GSE74094
Status Public on Dec 02, 2015
Title Persistent Requirement and Alteration of the Key Targets of PRDM1 during Primordial Germ Cell Development in Mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Primordial germ cells (PGCs) are the foundation of totipotency and vital for reproduction and heredity. PGCs in mice arise from the epiblast around Embryonic Day (E) 7.0, migrate through the hindgut endoderm, and colonize and proliferate in the embryonic gonads until around E13.5 prior to their differentiation either into pro-spermatogonia or oogonia. PRDM1, a transcriptional repressor, plays an essential role in PGC specification that includes robustly repressing a somatic mesodermal program. Using an inducible conditional knockout system, we show here that PRDM1 is critically required throughout PGC development. When Prdm1 was deleted in migrating PGCs at E9.5/E10.5 or in male gonadal PGCs at E11.5, PGCs were eliminated by apoptosis from around E10/5/E11.5 or E13.5, respectively. When Prdm1 was deleted in female gonadal PGCs at E11.5, PGCs progressed into the first meiotic prophase in an apparently normal fashion, but the oogonia exhibited an aberrant pachytene phenotype, undergoing abrupt apoptosis from around E16.5. The escape of a fraction of PGCs (~10%) from the Prdm1 deletion was sufficient to recover fairly normal germ-cell pools both in male and female adults. The key targets of PRDM1 in migrating/gonadal PGCs, including genes for development, apoptosis, and pro-spermatogonial differentiation, showed only a modest overlap with those upon PGC specification and were enriched with histone H3 lysine 27 tri-methylation (H3K27me3). Our findings provide a critical insight into the mechanism for maintaining the transcriptional integrity of PGCs.
 
Overall design Examination of Prdm1 conditional knock-out primordial germ cells
 
Contributor(s) Yamashiro C, Hirota T, Kurimoto K, Nakamura T, Yabuta Y, Nagaoka S, Ohta H, Yamamoto T, Saitou M
Citation(s) 26586842
Submission date Oct 16, 2015
Last update date May 15, 2019
Contact name Yukihiro Yabuta
E-mail(s) yabyab@anat2.med.kyoto-u.ac.jp
Organization name Kyoto University, Graduate school of medicine
Department Anatomy and Cell Biology
Street address Yoshida-Konoe-cho, Sakyo-ku
City Kyoto
State/province Kyoto
ZIP/Postal code 606-8501
Country Japan
 
Platforms (1)
GPL15907 AB 5500xl Genetic Analyzer (Mus musculus)
Samples (16)
GSM1909751 Control_1
GSM1909752 Control_2
GSM1909753 Control_3
Relations
BioProject PRJNA299005
SRA SRP064911

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74094_expression_Blimp1Tg.txt.gz 640.4 Kb (ftp)(http) TXT
GSE74094_expression_E10_E13_PGC.txt.gz 626.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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