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Series GSE74183 Query DataSets for GSE74183
Status Public on Jul 12, 2016
Title Clinical and biological characterization of children with FLT3-ITD-mutated acute myeloid leukemia
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We examined if the minimal residual disease (MRD) and the Allelic Ratio (AR) of FLT3 internal tandem duplication (ITD) mutated patients may be prognostic factors. We correlated these parameters both with event free survival (EFS), with incidence of relapse and with gene expression profile (GEP). GEP showed that patients with high-ITD-AR or persistent MRD had different expression profiles. Results indicated that the ITD-AR levels and the MRD after I induction course are associated with transcriptional oncogenic profiles, which highlight differences in epigenetic control that may explain the variability in outcome among FLT3-ITD patients
 
Overall design 100 ng of bone marrow RNA from 14 patients with de novo AML harboring FLT3-ITD mutation at diagnosis were hybridized on the GeneChip® Human Transcriptome Array 2.0. Class comparisons between different patient subgroups (high vs low Allelic Ratio, good vs poor responders) were performed.
 
Contributor(s) Zampini M, Manara E, Pigazzi M
Citation(s) 27416911
Submission date Oct 20, 2015
Last update date Oct 29, 2018
Contact name Matteo Zampini
E-mail(s) m.zampini@irpcds.org
Phone +390498211466
Organization name Istituto di Ricerca Pediatrica (IRP) CittĂ  della Speranza
Street address corso stati uniti 4
City Padova
State/province PD
ZIP/Postal code 35127
Country Italy
 
Platforms (1)
GPL17586 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
Samples (14)
GSM1912865 Primary AML patient 25
GSM1912866 Primary AML patient 30
GSM1912867 Primary AML patient 37
Relations
BioProject PRJNA299274

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74183_RAW.tar 343.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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