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Series GSE74566 Query DataSets for GSE74566
Status Public on Apr 27, 2017
Title The role of Hoxa9 and Meis1 in development of acute myeloid leukemia
Platform organism synthetic construct
Sample organism Mus musculus
Experiment type Non-coding RNA profiling by array
Summary OBJECTIVE: MEIS1, a HOX cofactor, collaborates with multiple HOX proteins, such as HOXA9, to accelerate the onset of acute myeloid leukemia (AML) through largely unknown molecular mechanisms. To further resolve these mechanisms, we conducted a structure-function analysis of Meis1 and miRNA expression profiling, in the context of Hoxa9 leukemogenesis. RESULTS: We show, in a murine bone marrow transplantation model, that the homeodomain of Meis1 is required for leukemogenic collaboration with Hoxa9. miRNA expression profiling of a Hoxa9 preleukemic cell line transduced with wild-type or Meis1 homeodomain mutant reveal deregulation of multiple miRNA including a set not previously implicated as Meis1 targets.
 
Overall design Murine bone marrow cells transduced with Hoxa9-GFP + empty MIY vector were compared to Hoxa9+Meis1 cells or Hoxa9+Meis1 with deleted homeodomain (DHD) cells and cultured for three or four weeks before harvest for miRNA expression array. Four independent experiments were performed for each of the three different conditions included in the study. Cells from all samples were also transplanted into lethally irradiated mice to test for their transforming and leukemic potential.
 
Contributor(s) Palmqvist L
Citation(s) 28399410
Submission date Nov 02, 2015
Last update date Jul 27, 2018
Contact name Lars Palmqvist
E-mail(s) lars.palmqvist@clinchem.gu.se
Organization name University of Gothenburg
Department Institute of Biomedicine
Lab Department of Laboratory Medicine
Street address Sahlgrenska University Hospital
City Gothenburg
ZIP/Postal code 41345
Country Sweden
 
Platforms (1)
GPL16384 [miRNA-3] Affymetrix Multispecies miRNA-3 Array
Samples (12)
GSM1923073 HOXA9+MIY w3 #1 mi
GSM1923074 HOXA9+MIY w3 #2 mi
GSM1923075 HOXA9+MIY w4 #1 mi
Relations
BioProject PRJNA301939

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74566_RAW.tar 30.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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