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Series GSE74579 Query DataSets for GSE74579
Status Public on Nov 03, 2015
Title Small nucleolar RNA and microRNA expression data from multiple sclerosis patients in relapse and remission.
Platform organism synthetic construct
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Multiple sclerosis is a common inflammatory and degenerative disease that causes neurological disability. It affects young adults and its prevalence is higher in women. The most common form is manifested as a series of acute episodes of neurological disability (relapses) followed by a recovery phase (remission). Recently, non-coding RNAs have emerged as new players in transcriptome regulation, and in turn, they could have a significant role in MS pathogenesis. In this context, our aim was to investigate the involvement of microRNAs and snoRNAs in the relapse-remission dynamics of MS in peripheral blood leucocytes, to shed light on the molecular and regulatory mechanisms that underlie this complex process. With this approach, we found that a subset of small non-coding RNAs (sncRNA) is altered in relapse and remission, revealing unexpected opposite changes that are sex dependent. Furthermore, we found that a relapse-related miRNA signature regulated general metabolism processes in leucocytes, and miRNA altered in remission are involved in the regulation of innate immunity. We observed that sncRNA dysregulation is different in relapse and remission leading to differences in transcriptome regulation, and that this process is sex dependent. In conclusion, relapse and remission have a different molecular background in men and women.
 
Overall design 24 multiple sclerosis patients with samples both in remission and relapse (2 samples for each patient; 48 blood samples in total) and 24 healthy controls were included in the study, for a total of 72 samples.
 
Contributor(s) Muñoz-Culla M, Otaegui D
Citation(s) 26831009
Submission date Nov 02, 2015
Last update date May 02, 2017
Contact name Maider Muñoz-Culla
E-mail(s) maider.munoz@ehu.eus
Organization name Biodonostia Institute
Street address Paseo Dr.Begiristain s/n
City San Sebastian
ZIP/Postal code 20014
Country Spain
 
Platforms (1)
GPL8786 [miRNA-1] Affymetrix Multispecies miRNA-1 Array
Samples (72)
GSM1923256 Leucocytes_healthy control_rep1
GSM1923257 Leucocytes_healthy control_rep2
GSM1923258 Leucocytes_healthy control_rep3
This SubSeries is part of SuperSeries:
GSE74586 SncRNA (microRNA & snoRNA) expression in leucocytes from multiple sclerosis relapse and remission and cultured peripheral blood mononuclear cells
Relations
BioProject PRJNA300867

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74579_RAW.tar 11.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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