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Series GSE75123 Query DataSets for GSE75123
Status Public on Jun 01, 2016
Title Leukocyte-Specific Protein1 Regulates T Cell Migration in Rheumatoid Arthritis
Organism Mus musculus
Experiment type Expression profiling by array
Summary Copy number variations (CNVs) have been implicated in human diseases. However, it remains unclear how they affect immune dysfunction and autoimmune diseases, including rheumatoid arthritis (RA). Here, we identified a novel LSP1 deletion variant for RA susceptibility located in 11p15.5. We replicated that the copy number of LSP1 is significantly lower in RA patients, which correlates positively with LSP1 protein expression levels. Differentially expressed genes in Lsp1-deficient primary T cells represent cell motility and immune and cytokine responses. Functional assays demonstrated that LSP1, induced by T cell receptor activation, negatively regulates T cell migration by reducing ERK activation in vitro. In mice with T cell-dependent chronic inflammation, loss of Lsp1 promotes migration of T cells into the target tissues as well as draining lymph nodes, exacerbating disease severity. Moreover, RA patients show diminished expression of LSP1 in peripheral T cells with increased migratory capacity, suggesting that the defect in LSP1 signaling lowers the threshold for T cell activation. Our work is the first to demonstrate how CNVs result in immune dysfunction and a disease phenotype. Particularly, our data highlights the importance of LSP1 CNVs and LSP1 insufficiency in the pathogenesis of RA and provides novel insights into the mechanisms underlying T cell migration toward the inflamed synovium in RA.
 
Overall design Total RNA was isolated from splenic T cells of Lsp1-deficient and wild-type mice, which were stimulated with anti-CD3/CD28 Abs for 6 hours.
 
Contributor(s) Hwang S, Park J, Hwang D, Kim W
Citation(s) 26554018
Submission date Nov 18, 2015
Last update date Jul 19, 2017
Contact name Ji-Hwan Park
E-mail(s) jhpark706@kribb.re.kr
Organization name Korea Research Institute of Bioscience and Biotechnology (KRIBB)
Lab Korean Bioinformation Center (KOBIC)
Street address 125 Gwahak-ro, Yuseong-gu
City Daejeon
ZIP/Postal code 34141
Country South Korea
 
Platforms (1)
GPL13912 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version)
Samples (8)
GSM1943635 T cell_WT_media_rep1
GSM1943636 T cell_WT_media_rep2
GSM1943637 T cell_KO_media_rep1
Relations
BioProject PRJNA302590

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75123_RAW.tar 34.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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