|
| Status |
Public on May 06, 2016 |
| Title |
Simultaneous pathway activity inference and global gene expression analysis using RNA-sequencing [myd88] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Two 96-well plates per genotype wild type and Myd88 knockout, 4 hour time series in 0.5 hr increments
|
| |
|
| Overall design |
Myd88 BMDM transcriptional profiling to complement TF-seq data
|
| |
|
| Contributor(s) |
O'Connell D, Kolde R |
| Citation(s) |
27211859 |
| Submission date |
Nov 19, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Raivo Kolde |
| E-mail(s) |
rkolde@mgh.harvard.edu
|
| Organization name |
Massachusetts General Hospital
|
| Department |
Center for Computational and Integrative Biology
|
| Street address |
185 Cambridge St.
|
| City |
Boston |
| State/province |
MASSACHUSETTS |
| ZIP/Postal code |
02114 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (384)
|
|
| This SubSeries is part of SuperSeries: |
| GSE75212 |
Simultaneous pathway activity inference and global gene expression analysis using RNA-sequencing |
|
| Relations |
| BioProject |
PRJNA302809 |
| SRA |
SRP066440 |
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