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Series GSE75218 Query DataSets for GSE75218
Status Public on Jan 25, 2016
Title Autophagy enforces functional integrity of regulatory T cells by coupling environmental cues and metabolic homeostasis
Organism Mus musculus
Experiment type Expression profiling by array
Summary Regulatory T (Treg) cells respond to immune and inflammatory signals to mediate immunosuppression, but how the functional integrity of Treg cells is maintained under activating environments is unclear. Here we show that autophagy is active in Treg cells and supports their lineage stability and survival fitness. Treg cell–specific deletion of Atg7 or Atg5, both essential genes in autophagy, leads to loss of Treg cells, greater tumor resistance and development of inflammatory disorders. Atg7-deficient Treg cells show increased apoptosis and readily lose expression of the transcription factor Foxp3, especially after activation. Mechanistically, autophagy deficiency upregulates mTORC1 and c-Myc and glycolytic metabolism, which contributes to defective Treg function. Therefore, autophagy couples environmental signals and metabolic homeostasis to protect lineage and survival integrity of Treg cells in activating contexts.
 
Overall design We used microarrays to explore the gene expression profiles differentially expressed in CD4+Foxp3-YFP+ Treg cells from untreated and rapamycin-treated Atg7+/- (Atg7-het; Atg7 +/fl crossed with Foxp3-Cre) and Atg7-/- (Atg7-KO; Atg7 fl/fl mice crossed with Foxp3-Cre) mice
 
Contributor(s) Wei J, Neale G, Chi H
Citation(s) 26808230
Submission date Nov 19, 2015
Last update date Feb 21, 2018
Contact name Geoffrey Neale
E-mail(s) geoffrey.neale@stjude.org
Organization name St Jude Childrens Research Hospital
Department Hartwell Center
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (16)
GSM1945889 Atg7+/- Treg cells untreated replicate 1
GSM1945890 Atg7+/- Treg cells untreated replicate 2
GSM1945891 Atg7+/- Treg cells untreated replicate 3
Relations
BioProject PRJNA302814

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75218_RAW.tar 136.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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