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Series GSE76121 Query DataSets for GSE76121
Status Public on Feb 17, 2017
Title Gene expression analysis of Thy1+LSK bone marrow cells from Nol3+/+ and Nol3-/- MPN mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Apoptosis Repressor with Caspase Recruitment Domain (ARC) was recently found to be highly expressed in solid tumors and in blast cells of patients with acute myeloid leukemia (AML). In this study, we assessed the functional and molecular consequences of loss of ARC on the hematopoietic system. We found, unexpectedly, that deletion of Nol3 (the gene that encodes ARC) in mice leads to development of a myeloproliferative neoplasm (MPN) resembling primary myelofibrosis (PMF). Nol3-/--induced MPN is transplantable into secondary recipient mice and is characterized by anemia, thrombocytopenia, extramedullary hematopoiesis, and bone marrow fibrosis. Despite an overall reduction in bone marrow cellularity Nol3-/- MPN mice have an expanded Thy1+LSK stem cell population with increased cell cycling, in addition to a myelomonocytic differentiation bias. Molecularly, the Nol3-/--induced phenotype is, at least in part, mediated by activation of cyclin-dependent kinases 4 (CDK4) and 6 (CDK6) and MYC. Nol3-/- MPN Thy1+LSK cells show significant molecular similarities with primary CD34+ cells isolated from patients with PMF. Furthermore, we found that Nol3 is deleted in patients with human myeloid malignancies and has decreased expression in a subset of patients with de novo AML. Our results reveal a novel role of Nol3 in normal hematopoiesis and in the pathogenesis of myeloid malignancies.
To obtain insight into the molecular mechanism of the Nol3-/- -induced MPN, we performed gene expression profiling on Thy1+LSK bone marrow cells from Nol3+/+ and Nol3-/- MPN mice
 
Overall design RNA was isolated from Thy1+LSK bone marrow cells from 11-18 month old Nol3+/+ or Nol3-/- MPN mice.
 
Contributor(s) Steidl U
Citation(s) 28232469
Submission date Dec 17, 2015
Last update date Feb 21, 2018
Contact name Robert Stanley
E-mail(s) robert.f.stanley@med.einstein.yu.edu
Phone 7184303788
Organization name Albert Einstein College of Medicine
Department Cell Biology
Lab Ulrich Steidl
Street address 1300 Morris Park Avenue, Chanin Building Rm 601
City Bronx
State/province New York
ZIP/Postal code 10461
Country USA
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (4)
GSM1974532 Thy1+LSK sorted bone marrow cells from NOL3+/+ mice rep1
GSM1974533 Thy1+LSK sorted bone marrow cells from NOL3+/+ mice rep2
GSM1974534 Thy1+LSK sorted bone marrow cells from NOL3-/- MPN mice rep1
Relations
BioProject PRJNA306357

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE76121_RAW.tar 37.2 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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