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Series GSE77623 Query DataSets for GSE77623
Status Public on Feb 06, 2016
Title Gene expression profile of Foxf1 induced tumor progression in a mouse model of prostate cancer
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report the gene expression profile of Foxf1 induced tumor progression in a mouse model of prostate cancer. Foxf1 was over expressed using lentivirus and confirmed with both qPCR and western blot. Gene Ontology analysis showed significant elevation of components of Erk5 MAPK signaling.
 
Overall design RNA was pooled from three separate control and Foxf1 over expressing TRAMP tumors after three weeks post-implantation into the subcutaneous compartment of syngenic mice
 
Contributor(s) Kalin TV
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Submission date Feb 05, 2016
Last update date May 15, 2019
Contact name Vladimir Kalinichenko
E-mail(s) Vladimir.Kalinichenko@cchmc.org
Organization name Cincinnati Children's Hospital Medical Center
Street address 3333 Burnet Ave
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (2)
GSM2055341 TRAMP tumor: Control
GSM2055342 TRAMP tumor: Foxf1 Over Expression
Relations
BioProject PRJNA311044
SRA SRP069341

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77623_RAW.tar 1.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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