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Series GSE77694 Query DataSets for GSE77694
Status Public on Dec 14, 2016
Title Iron deficiency anemia in mice involves alterations in mitophagy and gene expression in erythroblasts
Organism Mus musculus
Experiment type Expression profiling by array
Summary Since iron deficiency anemia (IDA) is one of the most common diseases in worldwide, it is an essential issue to prevent and to treat the IDA in public healthcare system. However, the precise adaptive responses and their mechanisms of the hematopoietic system induced by iron deficient state are not fully understood. In this study, low iron diet conditions which induce sever iron deficiency anemia in mice were established. Transcriptome analyses in erythroblasts under normal or iron deficient states were performed to describe the pathological details of IDA. Under iron deficient state, extensive gene expression changes and mitophagy disorder were induced during the terminal maturation of erythroblasts. These findings provide a new insight into pathophysiology and molecular biology of IDA and the function of iron as a coordinator of gene expression networks in erythrocyte maturation.
 
Overall design Subset II erythroblasts sorted from bone marrow of WT under normal diet or low iron diet after weaning for three weeks or seven weeks. Three biological replication was performed.
 
Contributor(s) Kato H, Hada H, Itoh-Nakadai A, Igarashi K
Citation(s) 27927768
Submission date Feb 08, 2016
Last update date Feb 02, 2018
Contact name Kazuhiko Igarashi
Organization name Tohoku University
Street address Seiryo 2-1
City Sendai
State/province Miyagi
ZIP/Postal code 980-8575
Country Japan
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (9)
GSM2056283 WT_Erythroblast_ND_1
GSM2056284 WT_Erythroblast_ND_2
GSM2056285 WT_Erythroblast_ND_3
Relations
BioProject PRJNA311218

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77694_RAW.tar 29.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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