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Series GSE7776 Query DataSets for GSE7776
Status Public on Oct 31, 2007
Title Ovarian Transcript Expression in Newborn Mouse
Organism Mus musculus
Experiment type Expression profiling by array
Summary Microarray analysis of normal newborn ovarian transcript levels, for use in comparison to array based studies of differential expression in mouse knockout models.
Keywords: Genetic Modification
 
Overall design Newborn ovaries were pooled separately from wild type animals and total RNA isolated using RNeasy mini kit (Qiagen, CA). Newborn ovaries were collected within 12 hours of delivery. Animal experimentation was approved by the Institutional Animal Care and Use Committee of Baylor College of Medicine. Three independently pooled RNA samples from wild type used to generate biotinylated cRNA. Biotinylated cRNA was hybridized to GeneChip Mouse Expression Set 430 2.0 (Affymetrix, Inc.). Since three independent experiments were performed from three independent pools of wild type RNA, signal intensities for particular genes were averaged between the three chips.
 
Contributor(s) Rajkovic A, Choi Y, Qin Y, Ballow D, Pangas S
Citation(s) 18509161
Submission date May 10, 2007
Last update date Feb 11, 2019
Contact name Aleksandar Rajkovic
E-mail(s) rajkovic@bcm.edu
Organization name Baylor College of Medicine
Street address One Baylor Plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platforms (3)
GPL339 [MOE430A] Affymetrix Mouse Expression 430A Array
GPL340 [MOE430B] Affymetrix Mouse Expression 430B Array
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (4)
GSM180004 Newborn Mouse Ovary_C57/129 WT_3
GSM180005 Newborn Mouse Ovary_C57/129 WT_2
GSM188460 Newborn Mouse Ovary_Wild Type_1
This SubSeries is part of SuperSeries:
GSE11897 Lim Homeobox Gene, LHX8, Is Essential for Mouse Oocyte Differentiation and Survival
Relations
BioProject PRJNA109021

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE7776_RAW.tar 14.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Raw data provided as supplementary file

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