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Series GSE7784 Query DataSets for GSE7784
Status Public on May 17, 2007
Title Expression profiling of double negative thymocytes
Organism Mus musculus
Experiment type Expression profiling by array
Summary In order to understand the molecular mechanisms of DN thymocyte development, it may be also of use to clarify how these developmental processes are regulated in terms of their entire gene expression, to which cell differentiation is ultimately ascribed.
In the current study, we approached this issue by investigating gene expression profiles in discrete subsets of DN thymocytes under development, in which DN2, DN3, and DN4 thymocytes were sorted and subjected to expression profiling analysis with high-density oligonucleotide microarrays.
Keywords: developmental stages
Overall design The DN2, DN3, and DN4 populations were FACS-sorted from DN thymocytes harvested from four C57BL/6 mice and analyzed by Affymetrix® Mouse Genome 430 2.0 Array® for gene expression. Four independent experiments were performed using 16 mice.
Contributor(s) Kawazu M, Yamamoto G, Yoshimi M, Yamamoto K, Asai T, Ichikawa M, Seo S, Nakagawa M, Chiba S, Kurokawa M, Ogawa S
Citation(s) 17911620
Submission date May 13, 2007
Last update date Feb 11, 2019
Contact name Masahito Kawazu
Fax +81-3-5804-6261
Organization name University of Tokyo Hospital
Department Department of Hematology and Oncology
Street address Hongo 7-3-1
City Bunkyo-ku
State/province Tokyo
ZIP/Postal code 113-8655
Country Japan
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (12)
GSM188611 thymocytes_DN2_1
GSM188612 thymocytes_DN2_2
GSM188613 thymocytes_DN2_3
BioProject PRJNA99807

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE7784_RAW.tar 75.3 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Raw data provided as supplementary file
Processed data provided as supplementary file

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