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Series GSE7803 Query DataSets for GSE7803
Status Public on Dec 11, 2007
Title Human pre-invasive and invasive cervical squamous cell carcinomas and normal cervical epithelia
Organism Homo sapiens
Experiment type Expression profiling by array
Summary 10 normal squamous cervical epitheilia samples, 7 high grade squamous intraepithelial lesions, and 21 invasive squamous cell carcinomas of the cervix samples were obtained using laser capture miicrodissection. Two rounds of T7-based linear RNA amplification using the Arcturus RiboAmp kit were performed for each sample, and assayed using Affymetrix HG_U133A arrays.
Keywords: disease state analysis
 
Overall design 10 normal squamous cervical epitheilia samples, 7 high grade squamous intraepithelial lesions, and 21 invasive squamous cell carcinomas of the cervix, each from different patients, were each assayed on single HG_U133A arrays. Three additional test samples were also assayed.

The log-transformed probe-set values and the results of the statistical analysis for each probe-set, and the associated README file, are included as Supplementary files.
 
Contributor(s) Zhai Y, Nan B, Kuick R, Ota I, Weiss SJ, Trimble CL, Fearon ER, Cho KR
Citation(s) 17974957
Submission date May 15, 2007
Last update date Feb 26, 2020
Contact name Rork Kuick
E-mail(s) rork@umich.edu
Phone 734-936-9241
Organization name University of Michigan
Street address University of Michigan, SPH II, 1415 Washington Heights, Room M2533
City Ann Arbor
State/province MI
ZIP/Postal code 48109-2029
Country USA
 
Platforms (1)
GPL96 [HG-U133A] Affymetrix Human Genome U133A Array
Samples (41)
GSM189381 Test Sample C-2T-1-Stand
GSM189382 Test Sample C-2T-2-100ng
GSM189383 Test Sample CS-87_15ng
Relations
BioProject PRJNA100017

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE7803_Cervical_carcinomas.xls 29.5 Mb (ftp)(http) XLS
GSE7803_RAW.tar 139.2 Mb (http)(custom) TAR (of CEL)
GSE7803_Readme.txt 3.3 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file
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