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Series GSE78835 Query DataSets for GSE78835
Status Public on Jun 02, 2016
Title Genetic dissection of the α-globin super-enhancer
Organism Mus musculus
Experiment type Other
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 27376235
Submission date Mar 02, 2016
Last update date May 15, 2019
Contact name Jim Hughes
E-mail(s) jim.hughes@imm.ox.ac.uk
Phone 1865222113
Organization name University of Oxford
Department MHU
Lab Genome Biology Group
Street address Weatherall Institute Of Molecular Me
City oxford
ZIP/Postal code OX3 9DS
Country United Kingdom
 
Platforms (2)
GPL16417 Illumina MiSeq (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (36)
GSM2077297 Fetal liver Knockout of alpha globin regulatory element R1, biological replicate 1 [ATAC-seq]
GSM2077298 Fetal liver Knockout of alpha globin regulatory element R1, biological replicate 2 [ATAC-seq]
GSM2077299 Fetal liver Knockout of alpha globin regulatory element R2, biological replicate 1 [ATAC-seq]
This SuperSeries is composed of the following SubSeries:
GSE78800 Dissection of a super-enhancer in vivo (ATAC-seq)
GSE78803 Dissection of a super-enhancer in vivo (Capture-C)
GSE78804 Dissection of a super-enhancer in vivo (ChIP-seq)
Relations
BioProject PRJNA314091

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE78835_RAW.tar 2.6 Gb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp

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