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Series GSE79084 Query DataSets for GSE79084
Status Public on Aug 23, 2017
Title Mouse hepatoblastoma models with expression of mutant β-catenin and/or c-Myc for therapeutic target identification of childhood liver cancer
Organism Mus musculus
Experiment type Expression profiling by array
Summary Hepatoblastoma (HB), the most common type of pediatric liver cancer, is associated with aberrant wnt/β-catenin activation and Myc amplification/overexpression. Mice expressing both alleles developed HBs and HCCs with incomplete penetrance by 5-6 weeks of age with fetal and mixed fetal/embryonal HBs, the most prevalent histologic HB subtypes seen in children being the predominant tumor types. To address the roles of mutant wnt/β-catenin activation and Myc over-expression in the pathogenesis of HB, c-Myc and mutant dominant-stable β-catenin were co-targeted to immature cells of the developing mouse liver.
 
Overall design Whole genome gene expression profiling with Agilent 1 color protocol were performed to total of 11 samples (4 Wild types, 3 with mutant beta-catenin expression, and 4 with c-Myc expression) derived from tumor-bearing livers.
 
Contributor(s) Comerford SA, Hinnant EA, Chen Y, Tomlinson GE, Hammer RE
Citation(s) 27734029
Submission date Mar 10, 2016
Last update date Jun 27, 2018
Contact name Yidong Chen
E-mail(s) cheny8@uthscsa.edu
Phone 2105629163
Organization name UT Health Science Center at San Antonio
Department Population Health Sciences
Street address 8403 Floyd Curl Drive, MSC 7784
City San Antonio
State/province Texas
ZIP/Postal code 78229
Country USA
 
Platforms (1)
GPL13912 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version)
Samples (11)
GSM2085011 WT 2130
GSM2085012 WT 2131
GSM2085013 WT 2132
Relations
BioProject PRJNA314896

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79084_RAW.tar 42.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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